Fig. 2
From: Unveiling plasmid diversity and functionality in pristine groundwater
MGEs are associated with multiple microbial lineages in groundwater. The phylogenetic tree was constructed using a protein concatenated alignment of refined MAGs generated with the GTDB-Tk tool. Non-CPR and CPR bacteria are highlighted in gray and purple, respectively. The innermost circle represents bacterial classification by class. The three outermost circles show the presence/absence of MGE associations across groundwater reference and non-redundant MAGs. MGE associations in archaea are shown in Supplementary Figure S3