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Fig. 4 | Environmental Microbiome

Fig. 4

From: Oak seedling microbiome assembly under climate warming and drought

Fig. 4

Differential abundance analysis of bacterial (a) and fungal (b) taxa under different growth conditions (temperature: 15 °C, 20 °C, 25 °C; soil moisture: control, drought) in rhizosphere using the linear discriminant analysis (LDA) effect size (LEfSe) algorithm. LDA-scores were calculated using the run_lefse function form the package microbiomeMarker with p-value cut-off set to below 0.0.5 for Kruskal-Wallis tests and we considered only LDA scores > 2

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