Gene | Objective | Target group | Primers | References |
---|---|---|---|---|
16S rRNA | Amplicon Sequencing | Bacteria and Archaea | 515F | Parada et al. [68] |
806R | Apprill et al. [3] | |||
16S rRNA | qPCR | Total archaeal community | 519F | Klindworth et al. [39] |
915R | Stahl and Amman [78] | |||
16S rRNA | qPCR | Total bacterial community | 515F | Caporaso et al. [8] |
806R | ||||
mcrA | qPCR | Methanogenic Archaea | mlas-mod-F | Steinberg and Regan [79] |
mcrA-rev | ||||
pmoA | qPCR | Methanotrophic Bacteria | A189f | Holmes et al. [33] |
MB661r | Costello and Lidstrom [11] |