Table 1 On the bacterial genus level, three approaches were applied: (1) core taxa, (2) key hub taxa (network analysis), and (3) most important taxa (random forest). Shared genera between all three approaches are in bold within each group
From: Unveiling the influence of salinity on bacterial microbiome assembly of halophytes and crops
Groups | (1) Core taxa | (2) Key Hub taxa | (3) Most important taxa |
|---|---|---|---|
High-halophytes | |||
| Â | Thalassospira | Thalassospira | Thalassospira |
Erythrobacter | Erythrobacter | Erythrobacter | |
Marinobacter | Marinobacter | Marinobacter | |
Marivirga | Gracilimonas | Marivirga | |
Devosia | Planomicrobium | Hoeflea | |
Lewinella | Psychroflexus | Marinoscillum | |
Marinoscillum | Martelella | Marinomonas | |
Fulvivirga | Fulvivirga | Devosia | |
Ilumatobacter | Tangfeifania | Lewinella | |
Maritalea | Â | Â | |
Muricauda | Â | Â | |
Roseovarius | Â | Â | |
Altererythrobacter | Â | Â | |
Pelagibius | Â | Â | |
Halomonas | Â | Â | |
Loktanella | Â | Â | |
Roseivivax | Â | Â | |
Low-halophytes | Â | Â | Â |
Kocuria | Kocuria | Kocuria-Rubellimicrobium | |
Rubellimicrobium | Rubellimicrobium | Actinophytocola - Microvirga | |
Microvirga | Povalibacter | Promicromonospora - Massilia | |
Brevundimonas | Pontibacter | Skermanella - Domibacillus | |
Skermanella | Steroidobacter | Glycomyces - Streptomyces | |
Mycobacterium | Gemmatimonas | Ensifer - Ohtaekwangia_koreensis | |
Sphingomonas | Agromyces | Steroidobacter - Planomicrobium | |
Nocardioides | Nonomuraea | Nocardioides - Paracoccus | |
Devosia | Lysinibacillus | Paenibacillus - Pseudonocardia | |
Rhizobium | Â | Solirubrobacter - Lysobacter | |
Actinophytocola | Â | Adhaeribacter - Saccharothrix | |
Bacillus | Â | Â | |
Phenylobacterium | Â | Â | |
Pseudomonas | Â | Â | |
Non-halophytes | Â | Â | Â |
Sphingomonas - Bradyrhizobium | Ignavibacterium | Sphingomonas - Bradyrhizobium | |
Mesorhizobium - Bosea | Melioribacter | Mesorhizobium - Opitutus | |
Opitutus - Paenibacillus | Syntrophobacter | Phenylobacterium - Nitrospira | |
Novosphingobium - Phenylobacterium | Thiobacillus | Gemmatimonas - Flavisolibacter | |
Roseomonas - Gemmatimonas | Rhodomicrobium | Pedobacter - Bacillus | |
Flavisolibacter - Amycolatopsis | Methylobacter | Mucilaginibacter - Burkholderia | |
Geodermatophilus - Nitrospira | Desulfosporosinus | Parafilimonas - Caulobacter | |
Clostridium_sensu_stricto - Pedobacter | Methylocystis | Sphingobium - Angustibacter | |
Nocardioides - Hyphomicrobium | Oligoflexus | Labrys - Reyranella_massiliensis Niastella | |
Flavobacterium - Mycobacterium | Â | Â | |
Labilithrix - Kribbella | Â | Â | |
Gaiella - Chryseolinea_serpens | Â | Â | |
Rhodococcus - Pseudonocardia | Â | Â | |
Devosia - Microvirga | Â | Â | |
Flavitalea | Â | Â | |